中华根瘤菌属

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中华根瘤菌属
费氏中华根瘤菌USDA257
费氏中华根瘤菌USDA257
科學分類
界: 细菌域 Bacteria
門: 变形菌门 Proteobacteria
綱: α-变形菌纲 Alphaproteobacteria
目: 根瘤菌目 Rhizobiales
科: 根瘤菌科 Rhizobiaceae
屬: 中华根瘤菌属 Sinorhizobium
剑菌属 Ensifer

Chen et al. 1988/Casida 1982
模式種
费氏中华根瘤菌 Sinorhizobium fredii/附着剑菌 Ensifer adhaerens
物种[1][2][3]

见内文

中华根瘤菌属剑菌属学名Sinorhizobium/Ensifer)是根瘤菌目根瘤菌科下的一属。该属中草木樨中华根瘤菌Sinorhizobium meliloti[4][5]苜蓿中华根瘤菌Sinorhizobium medicae[6]进行过测序。

名称[编辑]

该属曾先后于1982年与1988年被命名为剑菌属(Ensifer)与中华根瘤菌属(Sinorhizobium)。根据国际原核微生物系统学委员会(International Committee on Systematics of Prokaryotes,ISCP)的《细菌学法规》(Bacteriological Code)规定,发表时间更早的名称有优先命名权。[7]由于有人提议将当时剑菌属的唯一物种附着剑菌Ensifer adhaerens)并入中华根瘤菌属,为此ISCP设立了一个专门分委会对此进行评估。最终剑菌属保留其名称,并将所有中华根瘤菌属的物种并入剑菌属之中。[8][9]虽然如此,在大多学术著作中还是同时延用了这两个名称,而中华根瘤菌属一名则更为常见。

分类[编辑]

参考文献[编辑]

  1. ^ List of Prokaryotic names with Standing in Nomenclature—Genus Sinorhizobium
  2. ^ List of Prokaryotic names with Standing in Nomenclature—Genus Ensifer
  3. ^ Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. 2005: 354–361. ISBN 978-0-387-24145-6. 
  4. ^ Galibert, F. et al.. The composite genome of the legume symbiont Sinorhizobium meliloti.. Science. 2001, 293 (5530): 668–672. doi:10.1126/science.1060966. PMID 11474104. 
  5. ^ NCBI Genome Page for Sinorhizobium meliloti
  6. ^ NCBI Genome Page for Sinorhizobium medicae
  7. ^ Young, J. M. The genus name Ensifer Casida 1982 takes priority over Sinorhizobium Chen et al. 1988, and Sinorhizobium morelense Wang et al. 2002 is a later synonym of Ensifer adhaerens Casida 1982. Is the combination ‘Sinorhizobium adhaerens’ (Casida 1982) Willems et al. 2003 legitimate? Request for an Opinion. Int J Syst Bacteriol. 2003, 53 (6): 2107–2110. doi:10.1099/ijs.0.02665-0. 
  8. ^ Lindström, K., and Martinez-Romero, M. E. International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Agrobacterium and Rhizobium. Minutes of the meeting, 4 July 2001, Hamilton, Canada.. Int J Syst Bacteriol. 2002, 52 (6): 2337. 
  9. ^ Judicial Commission of the International Committee on Systematics of Prokaryotes. The genus name Sinorhizobium Chen et al. 1988 is a later synonym of Ensifer Casida 1982 and is not conserved over the latter genus name, and the species name ‘Sinorhizobium adhaerens’ is not validly published. Opinion 84.. Int J Syst Bacteriol. 2008, 58 (Pt 8): 1973. doi:10.1099/ijs.0.2008/005991-0. PMID 18676490. 
  10. ^ 10.0 10.1 Ogasawara, M., Suzuki, T., Mutoh, I., Annapurna, K., Arora, N. K., Nishimura, Y., and Maheshwari, D. K. Sinorhizobium indiaense sp. nov. and Sinorhizobium abri sp. nov. isolated from tropical legumes, Sesbania rostrata and Abrus precatorius, respectively. Symbiosis. 2003, 34 (1): 53–68. 
  11. ^ 11.0 11.1 Because no type strains have been submitted to international culture collections, these are not currently recognized as valid species.
  12. ^ L. E. Casida, Jr. Ensifer adhaerens gen. nov., sp. nov.: A Bacterial Predator of Bacteria in Soil. Int J Syst Bacteriol. 1982, 32 (3): 339–345. doi:10.1099/00207713-32-3-339. 
  13. ^ Toledo, I., Lloret, L., and Martínez-Romero, E. Sinorhizobium americanus sp. nov., a new Sinorhizobium species nodulating native Acacia spp. in Mexico. Syst Appl Microbiol. 2003, 26 (1): 54–64. doi:10.1078/072320203322337317. PMID 12747410. 
  14. ^ 14.0 14.1 Nick, G., de Lajudie, P., Eardly, B. D., Suomalainen, S., Paulin, L., Zhang, X., Gillis, M., and Lindström, K. Sinorhizobium arboris sp. nov. and Sinorhizobium kostiense sp. nov., isolated from leguminous trees in Sudan and Kenya. Int J Syst Bacteriol. 1999, 49 (Pt. 4): 1359–1368. doi:10.1099/00207713-49-4-1359. PMID 10555313. 
  15. ^ Reiner Rincón-Rosales, Lourdes Lloret, Edith Ponce, and Esperanza Martínez-Romero. Rhizobia with different symbiotic efficiencies nodulate Acaciella angustissima in Mexico, including Sinorhizobium chiapanecum sp. nov. which has common symbiotic genes with Sinorhizobium mexicanum. Syst Appl Microbiol. 2009, 67 (1): 103–117. doi:10.1111/j.1574-6941.2008.00590.x. PMC 2784085. PMID 19120461. 
  16. ^ Chen, W. X., Yan, G. H., and Li, J. L. Numerical taxonomic study of fast-growing soybean rhizobia and a proposal that Rhizobium fredii be assigned to Sinorhizobium gen. nov.. Int J Syst Bacteriol. 1988, 38 (4): 392–397. doi:10.1099/00207713-38-4-392. 
  17. ^ 17.0 17.1 C. Merabet, M. Martens, M. Mahdhi, F. Zakhia, A. Sy, C. Le Roux, O. Domergue, R. Coopman, A. Bekki, M. Mars, A. Willems and P. de Lajudie. Multi Locus Sequence Analysis of root nodule isolates from Lotus arabicus (Senegal), Lotus creticus, Argyrolobium uniflorum and Medicago sativa (Tunisia) and description of Ensifer numidicus sp. nov. and Ensifer garamanticus sp. nov.. Int J Syst Evol Microbiol. 2009,. (Epub ahead of print) (Pt 3): 1–33. doi:10.1099/ijs.0.012088-0. PMID 19656922. 
  18. ^ Wei, G. H., Wang, E. T., Tan, Z. Y., Zhu, M. E, and Chen, W. X. Rhizobium indigoferae sp. nov. and Sinorhizobium kummerowiae sp. nov., respectively isolated from Indigofera spp. and Kummerowia stipulacea. Int J Syst Evol Microbiol. 2002, 52 (Pt. 6): 2231–2239. doi:10.1099/ijs.0.02030-0. PMID 12508892. 
  19. ^ Rome, S., Fernandez, M. P., Brunel, B., Normand, P., Cleyet-Marel, J. C. Sinorhizobium medicae sp. nov., isolated from annual Medicago spp.. Int J Syst Bacteriol. 1996, 46 (4): 972–980. doi:10.1099/00207713-46-4-972. PMID 8863426. 
  20. ^ 20.0 20.1 20.2 Philippe de Lajudie, Anne Willems, Bruno Pot, Dirk Dewettinck, Gloria Maestrojuan, Marc Neyra, Matthew David Collins, Bernard Dreyfus, Karel Kersters, and Monique Gillis. Polyphasic Taxonomy of Rhizobia: Emendation of the Genus Sinorhizobium and Description of Sinorhizobium meliloti comb. nov., Sinorhizobium saheli sp. nov., and Sinorhizobium teranga sp. nov.. Int J Syst Bacteriol. 1994, 44 (4): 715–733. doi:10.1099/00207713-44-4-715. 
  21. ^ Lloret, L., Ormeño-Orrillo, E., Rincón, R., Martínez-Romero, J., Rogel-Hernández, M. A., and Martínez-Romero, E. Ensifer mexicanus sp. nov. a new species nodulating Acacia angustissima (Mill.) Kuntze in Mexico. FEMS Microbiology Ecology. 2007, 30 (4): 280–290. doi:10.1016/j.syapm.2006.12.002. PMID 17293074. 
  22. ^ Li, Q. Q, Tao Wang, E. T., Chang, Y. L., Zhang, Y. Z., Zhang, Y. M., Sui, X. H., Chen, W. F., and Chen, W. X. Ensifer (Sinorhizobium) sojae sp. nov., isolated from root nodules of Glycine max grown in saline-alkaline soils in Hebei province of China. Int J Syst Evol Microbiol. 2010, 49: 1359–1368. doi:10.1099/ijs.0.025049-0. PMID 20851917.